BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C01LP1|AL426483
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1097 1641 0.0
>3x_Contig1097
Length = 4271
Score = 1641 bits (828), Expect = 0.0
Identities = 831/832 (99%)
Strand = Plus / Plus
Query: 1 gatcatccaaggtttgaaattgattccaggtcaaatcaaagaagtcttgaacgtggaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2501 gatcatccaaggtttgaaattgattccaggtcaaatcaaagaagtcttgaacgtggaacc 2560
Query: 61 aaggatcaaagaactttgtgctaaagaattgaaggatcagaaatctttacttctattagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2561 aaggatcaaagaactttgtgctaaagaattgaaggatcagaaatctttacttctattagg 2620
Query: 121 tagaggttaccaattcgcaagtgccttggaaggtgcattgaagatcaaagaaatctctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2621 tagaggttaccaattcgcaagtgccttggaaggtgcattgaagatcaaagaaatctctta 2680
Query: 181 catgcattcagaaggtgtgcttgctggtgaattgaaacacggtgttctagcattagtcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2681 catgcattcagaaggtgtgcttgctggtgaattgaaacacggtgttctagcattagtcga 2740
Query: 241 cgaagatttaccaatcatcgctttcggtaccagagattccctattcccaaaggtcctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2741 cgaagatttaccaatcatcgctttcggtaccagagattccctattcccaaaggtcctttc 2800
Query: 301 ctcaatcgaacaagtgatagccagaaagggtcatccaatcattatctgcaacgaaaacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2801 ctcaatcgaacaagtgatagccagaaagggtcatccaatcattatctgcaacgaaaacga 2860
Query: 361 tgaagtttggcaaaacaaggccaaggccaacaatttgattactttggaagttccacaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2861 tgaagtttggcaaaacaaggccaaggccaacaatttgattactttggaagttccacaaac 2920
Query: 421 tgtcgactgtctacaaggtctattgaacattatcccattacaattgacctcatattggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2921 tgtcgactgtctacaaggtctattgaacattatcccattacaattgacctcatattggtt 2980
Query: 481 ggcagtaaacaacggtatcgacgtcgatttcccaagaaacttggctaaatccgtgactgt 540
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2981 ggcagtcaacaacggtatcgacgtcgatttcccaagaaacttggctaaatccgtgactgt 3040
Query: 541 cgagtaagaaaggctctatctttttctcattttgcgtacagtttatctaatttttctagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3041 cgagtaagaaaggctctatctttttctcattttgcgtacagtttatctaatttttctagt 3100
Query: 601 ttgtccgatacattctccacatatataattaacaaacccgtcagatcaattccgttcccc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3101 ttgtccgatacattctccacatatataattaacaaacccgtcagatcaattccgttcccc 3160
Query: 661 tcctacctactattaacattgtaacaccaatggtaaccctcttgtctcttgttttcatac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3161 tcctacctactattaacattgtaacaccaatggtaaccctcttgtctcttgttttcatac 3220
Query: 721 ctttaggtccgatttggtcttatttcggtttcttttcgaatgattgataccttgagataa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3221 ctttaggtccgatttggtcttatttcggtttcttttcgaatgattgataccttgagataa 3280
Query: 781 aaacagaaaaaaaaaaagggcaaaacattcaaatcgaactttaagtgccgaa 832
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3281 aaacagaaaaaaaaaaagggcaaaacattcaaatcgaactttaagtgccgaa 3332
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,472
Number of Sequences: 1807
Number of extensions: 12472
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)